This package is hidden from search results because it is not hosted in the universe of the upstream owner
fernphy. To fix this you can add URL: https://joelnitta.r-universe.dev/ftolr to the package DESCRIPTION file. See also theR-universe documentation.Package: ftolr 1.8.0
ftolr: Data for the Fern Tree of Life (FTOL)
Provides the Fern Tree of Life (FTOL) phylogeny and related data files.
Authors:
ftolr_1.8.0.tar.gz
ftolr_1.8.0.zip(r-4.7)ftolr_1.8.0.zip(r-4.6)ftolr_1.8.0.zip(r-4.5)
ftolr_1.8.0.tgz(r-4.6-any)ftolr_1.8.0.tgz(r-4.5-any)
ftolr_1.8.0.tar.gz(r-4.7-any)ftolr_1.8.0.tar.gz(r-4.6-any)
ftolr_1.8.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ftolr/json (API)
| # Install 'ftolr' in R: |
| install.packages('ftolr', repos = c('https://joelnitta.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/fernphy/ftolr/issues
Datasets:
- accessions_long - GenBank accessions used in the Fern Tree of Life (FTOL), long format
- accessions_wide - GenBank accessions used in the Fern Tree of Life (FTOL), wide format
- backbone_tree - Fern Tree of Life (FTOL) backbone phylogeny
- con_fossils - Fossil calibration points used for dating Fern Tree of Life
- ftol_con_dated_tree - Fern Tree of Life (FTOL) dated consensus phylogeny
- ftol_con_tree - Fern Tree of Life (FTOL) consensus phylogeny
- ftol_ferns - Fern Tree of Life (FTOL) fern species
- ftol_match_results - Fern Tree of Life (FTOL) taxonomic name matching results
- ftol_ml_dated_tree - Fern Tree of Life (FTOL) dated maximum-likelihood phylogeny
- ftol_ml_tree - Fern Tree of Life (FTOL) maximum-likelihood phylogeny
- ftol_taxonomy - Fern Tree of Life (FTOL) taxonomic data
- ml_fossils - Fossil calibration points used for dating Fern Tree of Life
- plastome_alignment - Aligned plastome DNA sequences used to build Fern Tree of Life
- plastome_parts - Start and end positions of loci in plastome DNA sequence alignment
- sanger_alignment - Aligned
- sanger_parts - Start and end positions of loci in Sanger DNA sequence alignment
Last updated from:4cfc1f2aef. Checks:7 ERROR, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | ERROR | 202 | ||
| source / vignettes | OK | 309 | ||
| linux-release-x86_64 | ERROR | 185 | ||
| macos-release-arm64 | ERROR | 129 | ||
| macos-oldrel-arm64 | ERROR | 195 | ||
| windows-devel | ERROR | 147 | ||
| windows-release | ERROR | 149 | ||
| windows-oldrel | ERROR | 185 | ||
| wasm-release | OK | 145 |
Exports:ft_data_verft_seqsft_tree
